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    • CellRank dev (2023-03-26)
    • CellRank 1.5.1 (2022-01-13)
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    • CellRank 1.3.1 (2021-04-09)
    • CellRank 1.3.0 (2021-03-29)
    • CellRank 1.2.0 (2021-02-02)
    • CellRank 1.1.0 (2020-11-17)
    • CellRank 1.0.0 (2020-10-17)
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cellrank.datasets.pancreas_preprocessed#

cellrank.datasets.pancreas_preprocessed(path='datasets/endocrinogenesis_day15.5_preprocessed.h5ad', **kwargs)[source]#

Development of the murine pancreas at E15.5 from [Bastidas-Ponce et al., 2019], preprocessed according to the basic tutorial.

Parameters:
  • path (Union[str, Path]) – Path where to save the dataset.

  • kwargs (Any) – Keyword arguments for scanpy.read().

Return type:

AnnData

Returns:

: adata : anndata.AnnData

Annotated data object.

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  • cellrank.datasets.pancreas_preprocessed
    • pancreas_preprocessed()