cellrank.datasets.zebrafish#

cellrank.datasets.zebrafish(path='datasets/zebrafish.h5ad', **kwargs)[source]#

Zebrafish embryogenesis assayed using drop-seq, restricted to the axial mesoderm lineage from [Farrell et al., 2018].

sc-RNA-seq time-series dataset comprising 2434 cells which contains 12 time-points spanning 3.3-12 hours past fertilization.

Parameters:
Return type:

AnnData

Returns:

adata : anndata.AnnData Annotated data object.