compute_lineage_drivers(lineages=None, cluster_key=None, clusters=None, layer='X', use_raw=False, return_drivers=False)¶
Compute driver genes per lineage.
Correlates gene expression with lineage probabilities, for a given lineage and set of clusters. Often, it makes sense to restrict this to a set of clusters which are relevant for the specified lineages.
lineage_drivers- the driver genes for each lineage.
return_drivers=True, returns the lineage drivers as
- Return type