cellrank.datasets.pancreas
- cellrank.datasets.pancreas(path='datasets/endocrinogenesis_day15.5.h5ad', **kwargs)[source]
Development of the murine pancreas at E15.5 from [Bastidas-Ponce et al., 2019].
scRNA-seq dataset comprising 2531 cells recorded using 10x Chromium in a single time point. Data was filtered to remove heavily cycling populations and to focus on the late stages of endocrinogenesis.
Contains raw spliced and un-spliced count data, low-dimensional embedding coordinates as well as original cluster annotations.
- Parameters
**kwargs – Keyword arguments for
scanpy.read().
- Return type
- Returns
adata :
anndata.AnnDataAnnotated data object.