cellrank.datasets.zebrafish

cellrank.datasets.zebrafish(path='datasets/zebrafish.h5ad', **kwargs)[source]

Zebrafish embryogenesis assayed using drop-seq, restricted to the axial mesoderm lineage from [Farrell et al., 2018].

scRNA-seq time-series dataset comprising 2434 cells which contains 12 time-points spanning 3.3-12 hours past fertilization.

Parameters
Return type

AnnData

Returns

adata : anndata.AnnData Annotated data object.