How to cite us#
If you find CellRank useful for your research, please consider citing [Lange et al., 2022] as:
@article{lange:22,
title = {CellRank for directed single-cell fate mapping},
author = {Lange, Marius and Bergen, Volker and Klein, Michal and Setty, Manu and
Reuter, Bernhard and Bakhti, Mostafa and Lickert, Heiko and
Ansari, Meshal and Schniering, Janine and Schiller, Herbert B. and
Pe'er, Dana and Theis, Fabian J.},
journal = {Nat. Methods},
year = {2022},
doi = {10.1038/s41592-021-01346-6},
publisher = {Nature Publishing Group}
}
In addition, if you use cellrank.estimators.GPCCA
to compute initial, terminal or intermediate states, you are
using the pyGPCCA package [Reuter et al., 2022] under the hood, which implements the
Generalized Perron Cluster Cluster Analysis (GPCCA) algorithm. Thus, additionally to CellRank, please cite GPCCA
[Reuter et al., 2019] as:
@article{reuter:19,
author = {Reuter,Bernhard and Fackeldey,Konstantin and Weber,Marcus },
title = {Generalized Markov modeling of nonreversible molecular kinetics},
journal = {The Journal of Chemical Physics},
volume = {150},
number = {17},
pages = {174103},
year = {2019},
doi = {10.1063/1.5064530},
}