cellrank.datasets.bone_marrow#
- cellrank.datasets.bone_marrow(path='datasets/bone_marrow.h5ad', **kwargs)[source]#
sc-RNA-seq dataset early human hematopoiesis (CD34+ bone marrow cells) assayed using 10X Chromium.
This dataset contains raw spliced and unspliced counts estimated using velocyto [La Manno et al., 2018]. Furthermore, the dataset also contains a precomputed Palantir pseudotime [Setty et al., 2019].
- Parameters:
kwargs (
Any
) – Keyword arguments forscanpy.read()
.
- Return type:
- Returns:
: adata :
anndata.AnnData
Annotated data object.